The cage was engineered with amino acid replacements by introducing site-specific mutations that allowed more IrCp* uptake. Credit: Takafumi Ueno from Tokyo Institute of Technology
A novel hybrid ferritin nanocage with histidine residues shows 1.5 times higher metal ion uptake and improved catalytic efficiency for alcohol production, find researchers from Tokyo Tech in a new study. Their findings suggest that hybrid bio-nanocages could effectively catalyze reactions to yield industrially important products.
Biological polymers can spontaneously self-assemble into complex structures that resemble vessels or cages, but are much smaller, and are referred to as “nano-cages.” These structures can accommodate a wide range of molecules inside them that behave as “guests.” One popular example is the “ferritin nanocage,” which is formed by the self-assembly of 24 subunits into the protein ferritin and can enclose metal ions that are important catalysts. With the help of these metal ions, a catalytic reaction converts any substrate into a product. Although widely known, the ferritin cage’s potential applications in industry have yet to be fully explored.
Thus far, most efforts to increase metal ion uptake in ferritin have resulted in cages with low stability. To make the “guest” sit well within the cage, effective design is the key. Keeping that in mind, a team of scientists led by Prof. Takafumi Ueno, from Tokyo Institute of Technology, Japan (Tokyo Tech), introduced site-specific mutations at the core of the ferritin nanocage and increased its uptake of iridium complex (IrCp*). Their findings are published in Angewandte Chemie. Iridium is a vital catalyst in the alcohol production pathway and is used commercially in the pharmaceutical, food, and chemical industries.
The nanocage acts as a hybrid bio-catalyst during the conversion of substrates to alcohols with high specificity. Credit: Takafumi Ueno from Tokyo Institute of Technology
Prof. Ueno explains, “Based on previous literature, we knew that the presence of coordination amino acidsAmino acids are a set of organic compounds used to build proteins. There are about 500 naturally occurring known amino acids, though only 20 appear in the genetic code. Proteins consist of one or more chains of amino acids called polypeptides. The sequence of the amino acid chain causes the polypeptide to fold into a shape that is biologically active. The amino acid sequences of proteins are encoded in the genes. Nine proteinogenic amino acids are called “essential” for humans because they cannot be produced from other compounds by the human body and so must be taken in as food.”>amino acids in the cage improve iridium activity, and that substituting these amino acids with appropriate residues could alleviate the problem. Since iridium complex behaves as a catalyst, coordination residues would do the job.” The authors used the amino acidAny substance that when dissolved in water, gives a pH less than 7.0, or donates a hydrogen ion.”>acid histidine to replace two residues, arginine, and aspartic acid of the regular (wild type) ferritin cages and create the mutants R52H and D38H. Remarkably, the assembly structure or cage size were not affected by these changes.
Next, they added IrCp* to the mutants and found that R52H was able to embed 1.5 times more iridium atoms than the wild type cage (Figure 1). But, what struck them was the D38H mutant, which behaved exactly like the wild type! So, why didn’t both mutations have the same effect? According to Prof. Ueno, “This implies that it is not only the presence of the histidine residue but also its position that is crucial to determine uptake efficiency in the cage.”
Using the new catalytic cages, the researchers were able to accomplish alcohol production rates as high as 88%. Evidently, the mutations favored a structural re-arrangement of the reaction components, which enhanced the conversion rate (Figure 2).
To understand how the substrate behaved inside the cage, the researchers used simulations wherein the substrate molecules could move freely within the nanocage. They observed some interactions between the substrate and histidine in the R52H mutant, which were not present in the wild type cage, i.e., the substrate showed preferential binding within the nanocage.
“These hybrid bio-nanocages were also found to be highly stable, suggesting that they could be used as viable catalysts in industrial applications,” concludes Prof. Ueno. The current structure-based design of the metal ion binding site research could be advanced to create novel ferritin mutants with selective uptake of specific guest molecules, for varied catalytic applications in the chemical and pharmaceutical industry.
Reference: “Controlled Uptake of an Iridium Complex inside Engineered apo-Ferritin Nanocages: Study of Structure and Catalysis” by Mohd Taher, Basudev Maity, Taiki Nakane, Satoshi Abe, Takafumi Ueno and Shyamalava Mazumdar, 10 January 2022, Angewandte Chemie.
DOI: 10.1002/anie.202116623
Source: SciTechDaily
